Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14375 and 14376 are separated by 170 nucleotides14376 and 14377 are separated by 497 nucleotides14377 and 14378 are separated by 111 nucleotides14378 and 14379 are separated by 508 nucleotides mRNA_6007: 14375 - Hypothetical Protein, at 1,439,226 to 1,440,523 14375 mRNA_6008: 14376 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 1,440,694 to 1,441,642 14376 mRNA_6009: 14377 - K13939 FOL1 dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase, at 1,442,140 to 1,444,838 14377 mRNA_6010: 14378 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF103473, at 1,444,950 to 1,447,121 14378 mRNA_6011: 14379 - HMMPfam-F-box-like-PF12937, at 1,447,630 to 1,450,531 14379
Group Condition mRNA_6007 mRNA_6008 mRNA_6009 mRNA_6010 mRNA_6011
14375 14376 14377 14378 14379
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.3 N.D. -0.8 -0.1
auxotrophy Dropout Complete -0.2 -0.2 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 N.D. -0.7 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 N.D. -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 N.D. +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. -0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.2 N.D. -0.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 N.D. -0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 N.D. +0.1 -0.4
growth on ricinoleic acid YNB Glucose +0.1 +0.2 N.D. -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 N.D. +0.0 +0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.1 N.D. +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 N.D. -0.3 +0.3
auxotrophy YNB Glucose +0.2 +0.1 N.D. +0.0 +0.1
growth on oleic acid YNB Glucose +0.3 -0.2 N.D. +0.3 +0.0
growth on ypd YPD +0.4 -0.2 N.D. -0.3 +0.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 -0.2 N.D. -0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.6 N.D. -0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 N.D. +0.1 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.2 N.D. +0.6 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.4 N.D. +0.5 +0.3
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