Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14376 and 14377 are separated by 497 nucleotides14377 and 14378 are separated by 111 nucleotides14378 and 14379 are separated by 508 nucleotides14379 and 14380 are separated by 480 nucleotides mRNA_6008: 14376 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 1,440,694 to 1,441,642 14376 mRNA_6009: 14377 - K13939 FOL1 dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase, at 1,442,140 to 1,444,838 14377 mRNA_6010: 14378 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF103473, at 1,444,950 to 1,447,121 14378 mRNA_6011: 14379 - HMMPfam-F-box-like-PF12937, at 1,447,630 to 1,450,531 14379 mRNA_6012: 14380 - Hypothetical Protein, at 1,451,012 to 1,452,136 14380
Group Condition mRNA_6008 mRNA_6009 mRNA_6010 mRNA_6011 mRNA_6012
14376 14377 14378 14379 14380
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. -0.5 -0.2 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.7 +0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.3 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. -0.8 -0.1 +0.0
auxotrophy Dropout Complete -0.2 N.D. -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. +0.1 -0.4 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. +0.2 -0.3 -0.2
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.1 -0.2 -0.3
growth on oleic acid YNB Glucose -0.2 N.D. +0.3 +0.0 -0.3
auxotrophy YNB Glucose +0.1 N.D. +0.0 +0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.0 +0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.3 +0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. -0.4 +0.3 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.3 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.3 -0.0 +0.6
growth on ypd YPD -0.2 N.D. -0.3 +0.7 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 N.D. -0.2 +0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. +0.5 +0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. +0.1 +0.5 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. +0.6 +0.4 +0.2
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