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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14380 and 14381 are separated by 325 nucleotides
14381 and 14382 are separated by 125 nucleotides
14382 and 14383 are separated by 612 nucleotides
14383 and 14384 are separated by 660 nucleotides
mRNA_6012: 14380 - Hypothetical Protein, at 1,451,012 to 1,452,136
14380
mRNA_6013: 14381 - Hypothetical Protein, at 1,452,462 to 1,453,877
14381
mRNA_6014: 14382 - K14785 ESF2, ABT1 ESF2/ABP1 family protein, at 1,454,003 to 1,455,202
14382
mRNA_6015: 14383 - K12619 XRN2, RAT1 5'-3' exoribonuclease 2, at 1,455,815 to 1,459,518
14383
mRNA_6016: 14384 - Hypothetical Protein, at 1,460,179 to 1,461,527
14384
Group
Condition
mRNA
_6012
mRNA
_6013
mRNA
_6014
mRNA
_6015
mRNA
_6016
14380
14381
14382
14383
14384
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.0
N.D.
N.D.
-0.4
growth on oleic acid
YNB Glucose
-0.3
-0.4
N.D.
N.D.
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.5
N.D.
N.D.
+0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
N.D.
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
+0.1
N.D.
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.6
N.D.
N.D.
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.1
N.D.
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.4
N.D.
N.D.
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.5
N.D.
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.4
N.D.
N.D.
+0.2
growth on ricinoleic acid
YNB Glucose
-0.3
+0.1
N.D.
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.5
N.D.
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.1
N.D.
N.D.
+0.2
auxotrophy
YNB Glucose
-0.3
-0.1
N.D.
N.D.
+0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.3
N.D.
N.D.
+0.1
auxotrophy
Dropout Complete
-0.1
-0.1
N.D.
N.D.
+0.6
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.0
N.D.
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.1
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
+0.2
N.D.
N.D.
+0.3
growth on ypd
YPD
+0.3
+0.3
N.D.
N.D.
+0.6
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