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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14382 and 14383 are separated by 612 nucleotides
14383 and 14384 are separated by 660 nucleotides
14384 and 14385 are separated by 435 nucleotides
14385 and 14386 are separated by 44 nucleotides
mRNA_6014: 14382 - K14785 ESF2, ABT1 ESF2/ABP1 family protein, at 1,454,003 to 1,455,202
14382
mRNA_6015: 14383 - K12619 XRN2, RAT1 5'-3' exoribonuclease 2, at 1,455,815 to 1,459,518
14383
mRNA_6016: 14384 - Hypothetical Protein, at 1,460,179 to 1,461,527
14384
mRNA_6017: 14385 - Hypothetical Protein, at 1,461,963 to 1,463,286
14385
mRNA_6018: 14386 - Hypothetical Protein, at 1,463,331 to 1,463,528
14386
Group
Condition
mRNA
_6014
mRNA
_6015
mRNA
_6016
mRNA
_6017
mRNA
_6018
14382
14383
14384
14385
14386
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.4
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.2
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.1
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.3
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.2
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.0
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.0
+0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.0
+0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-0.1
+0.4
N.D.
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.0
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.3
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.3
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.1
+0.4
N.D.
auxotrophy
YNB Glucose
N.D.
N.D.
+0.5
+0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.1
+0.5
N.D.
auxotrophy
Dropout Complete
N.D.
N.D.
+0.6
+0.0
N.D.
growth on ypd
YPD
N.D.
N.D.
+0.6
+0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
+0.2
+0.5
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.2
+0.6
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.4
+0.5
N.D.
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