Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14388 and 14389 are separated by 325 nucleotides14389 and 14390 are separated by 499 nucleotides14390 and 14391 are separated by 309 nucleotides14391 and 14392 are separated by 288 nucleotides mRNA_6020: 14388 - SUPERFAMILY--SSF52047, at 1,464,544 to 1,465,976 14388 mRNA_6021: 14389 - Hypothetical Protein, at 1,466,302 to 1,468,008 14389 mRNA_6022: 14390 - SUPERFAMILY--SSF52047, at 1,468,508 to 1,469,944 14390 mRNA_6023: 14391 - K03293 TC.AAT amino acid transporter, AAT family, at 1,470,254 to 1,472,430 14391 mRNA_6024: 14392 - Hypothetical Protein, at 1,472,719 to 1,473,425 14392
Group Condition mRNA_6020 mRNA_6021 mRNA_6022 mRNA_6023 mRNA_6024
14388 14389 14390 14391 14392
growth on ricinoleic acid YNB Glucose -1.2 -0.1 +0.0 -0.5 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 -0.0 +0.2 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.6 -0.1 -0.2 +0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.5 -0.1 +0.3 -0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 +0.0 +0.1 +0.4 +0.3
auxotrophy YNB Glucose 75mM Arginine -1.3 -0.1 +0.4 -0.0 +0.2
auxotrophy YNB Glucose -0.6 -0.1 +0.1 -0.3 +0.2
auxotrophy Dropout Complete -0.5 -0.0 +0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 +0.0 -0.0 +0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.2 +0.0 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 +0.1 +0.3 -0.1
growth on oleic acid YNB Glucose -0.4 -0.0 +0.3 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.1 +0.3 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 +0.1 +0.4 +0.2
growth on oleic acid YNB Oleic Acid +0.5 -0.0 +0.1 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 +0.1 +0.2 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.1 +0.4 +0.7 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.7 -0.2 +0.1 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.6 -0.1 +0.4 +0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy +1.0 -0.0 +0.2 +0.1 +0.5
growth on ypd YPD +1.8 -0.1 +0.1 -0.1 +0.4
remove
mRNA_6020
plot
remove
mRNA_6021
plot
remove
mRNA_6022
remove
mRNA_6023
plot
remove
mRNA_6024
plot