Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14395 and 14396 are separated by 26 nucleotides
14396 and 14397 are separated by 203 nucleotides
14397 and 14398 are separated by 252 nucleotides
14398 and 14399 are separated by 334 nucleotides
mRNA_6027: 14395 - HMMPfam-Cysteine-rich secretory protein family-PF00188,PRINTS-Allergen V5/Tpx-1 family signature-PR00837,SMART-SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.-SM00198,SUPERFAMILY--SSF55797, at 1,478,977 to 1,480,198
14395
mRNA_6028: 14396 - KOG2521 Uncharacterized conserved protein, at 1,480,225 to 1,481,311
14396
mRNA_6029: 14397 - K01056 PTH1, pth, spoVC peptidyl-tRNA hydrolase, PTH1 family, at 1,481,515 to 1,482,449
14397
mRNA_6030: 14398 - KOG4036 Uncharacterized conserved protein, at 1,482,702 to 1,483,838
14398
mRNA_6031: 14399 - KOG2890 Predicted membrane protein, at 1,484,173 to 1,485,684
14399
Group
Condition
mRNA
_6027
mRNA
_6028
mRNA
_6029
mRNA
_6030
mRNA
_6031
14395
14396
14397
14398
14399
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
+0.2
N.D.
+0.3
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.0
N.D.
-0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
+0.1
N.D.
+0.3
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.6
-0.1
N.D.
+0.1
-0.0
growth on oleic acid
YNB Oleic Acid
-0.2
+0.3
N.D.
+0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.0
N.D.
+0.1
+0.1
auxotrophy
Dropout Complete
-0.1
-0.0
N.D.
-0.0
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.0
N.D.
+0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
N.D.
+0.3
-0.2
auxotrophy
YNB Glucose
+0.0
+0.1
N.D.
+0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.1
N.D.
+0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.0
N.D.
-0.0
+0.3
growth on oleic acid
YNB Glucose
+0.1
+0.2
N.D.
+0.4
-0.3
growth on ricinoleic acid
YNB Glucose
+0.2
+0.2
N.D.
+0.2
-0.2
growth on ypd
YPD
+0.2
-0.1
N.D.
-0.0
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
+0.3
N.D.
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.6
+0.0
N.D.
-0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.4
N.D.
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.1
+0.0
N.D.
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+2.1
+0.2
N.D.
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.7
+0.0
N.D.
+0.4
+0.0
remove
mRNA_6027
plot
remove
mRNA_6028
plot
remove
mRNA_6029
remove
mRNA_6030
plot
remove
mRNA_6031
plot