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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14398 and 14399 are separated by 334 nucleotides
14399 and 14400 are separated by 520 nucleotides
14400 and 14401 are separated by 822 nucleotides
14401 and 14402 are separated by 1288 nucleotides
mRNA_6030: 14398 - KOG4036 Uncharacterized conserved protein, at 1,482,702 to 1,483,838
14398
mRNA_6031: 14399 - KOG2890 Predicted membrane protein, at 1,484,173 to 1,485,684
14399
mRNA_6032: 14400 - Hypothetical Protein, at 1,486,205 to 1,487,772
14400
mRNA_6033: 14401 - Hypothetical Protein, at 1,488,595 to 1,490,149
14401
mRNA_6034: 14402 - K14561 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4, at 1,491,438 to 1,492,813
14402
Group
Condition
mRNA
_6030
mRNA
_6031
mRNA
_6032
mRNA
_6033
mRNA
_6034
14398
14399
14400
14401
14402
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.4
-0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
-0.0
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.1
-0.4
-0.2
N.D.
growth on oleic acid
YNB Oleic Acid
+0.1
-0.5
-0.1
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.4
-0.1
-0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.3
-0.1
+0.1
N.D.
auxotrophy
Dropout Complete
-0.0
+0.0
-0.1
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.2
-0.1
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.1
-0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.0
-0.2
-0.1
N.D.
auxotrophy
YNB Glucose
+0.2
-0.2
-0.0
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
-0.1
+0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.3
+0.1
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.4
-0.2
+0.4
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
-0.1
+0.2
N.D.
growth on oleic acid
YNB Glucose
+0.4
-0.3
-0.0
+0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.1
+0.0
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
-0.2
+0.2
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
+0.1
+0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.2
+0.3
+0.5
N.D.
growth on ypd
YPD
-0.0
+0.7
+0.3
+0.1
N.D.
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