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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14401 and 14402 are separated by 1288 nucleotides
14402 and 14403 are separated by 215 nucleotides
14403 and 14404 are separated by 246 nucleotides
14404 and 14405 are separated by 269 nucleotides
mRNA_6033: 14401 - Hypothetical Protein, at 1,488,595 to 1,490,149
14401
mRNA_6034: 14402 - K14561 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4, at 1,491,438 to 1,492,813
14402
mRNA_6035: 14403 - Hypothetical Protein, at 1,493,029 to 1,494,012
14403
mRNA_6036: 14404 - Hypothetical Protein, at 1,494,259 to 1,495,316
14404
mRNA_6037: 14405 - SUPERFAMILY--SSF52047, at 1,495,586 to 1,496,740
14405
Group
Condition
mRNA
_6033
mRNA
_6034
mRNA
_6035
mRNA
_6036
mRNA
_6037
14401
14402
14403
14404
14405
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
N.D.
-0.3
-0.3
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
N.D.
-0.8
-0.4
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
N.D.
+0.3
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
-0.3
-0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
-0.1
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
N.D.
-0.0
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.1
-0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
+0.5
-0.0
-0.4
auxotrophy
Dropout Complete
+0.0
N.D.
+0.3
-0.2
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
+0.4
+0.2
-0.4
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
+0.4
+0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
N.D.
-0.1
+0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
+0.4
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
N.D.
+0.2
+0.2
+0.4
growth on oleic acid
YNB Glucose
+0.1
N.D.
+0.3
+0.6
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
N.D.
+0.3
+0.1
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
N.D.
+0.9
+0.4
-0.2
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
+0.6
+0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
N.D.
+0.3
+0.5
+0.0
growth on ypd
YPD
+0.1
N.D.
+0.8
+0.5
-0.1
auxotrophy
YNB Glucose
+0.2
N.D.
+0.5
+0.5
+0.2
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