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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14408 and 14409 are separated by 600 nucleotides
14409 and 14410 are separated by 229 nucleotides
14410 and 14411 are separated by 192 nucleotides
14411 and 14412 are separated by 462 nucleotides
mRNA_6040: 14408 - Hypothetical Protein, at 1,500,526 to 1,502,132
14408
mRNA_6041: 14409 - Hypothetical Protein, at 1,502,733 to 1,506,557
14409
mRNA_6042: 14410 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 1,506,787 to 1,508,526
14410
mRNA_6043: 14411 - Hypothetical Protein, at 1,508,719 to 1,509,973
14411
mRNA_6044: 14412 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1,510,436 to 1,511,474
14412
Group
Condition
mRNA
_6040
mRNA
_6041
mRNA
_6042
mRNA
_6043
mRNA
_6044
14408
14409
14410
14411
14412
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
N.D.
+0.5
+0.0
-1.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
N.D.
-0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
+0.2
-0.3
-0.4
auxotrophy
YNB Glucose
-0.3
N.D.
-0.2
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
-0.2
+0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.3
N.D.
-0.2
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.0
+0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
N.D.
+0.1
-0.1
-0.0
auxotrophy
Dropout Complete
-0.3
N.D.
+0.2
-0.3
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
+0.2
+0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
-0.2
+0.1
+0.1
growth on oleic acid
YNB Glucose
-0.1
N.D.
+0.3
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
+0.0
-0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
-0.2
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
N.D.
+0.0
+0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
N.D.
-0.0
+0.1
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
N.D.
-0.1
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
+0.0
+0.2
+0.0
growth on oleic acid
YNB Oleic Acid
+0.2
N.D.
+0.2
-0.1
+0.4
growth on ricinoleic acid
YNB Glucose
+0.5
N.D.
-0.0
+0.2
+0.4
growth on ypd
YPD
+0.8
N.D.
+0.1
+0.2
+0.1
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