Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14410 and 14411 are separated by 192 nucleotides
14411 and 14412 are separated by 462 nucleotides
14412 and 14413 are separated by 585 nucleotides
14413 and 14414 are separated by 580 nucleotides
mRNA_6042: 14410 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 1,506,787 to 1,508,526
14410
mRNA_6043: 14411 - Hypothetical Protein, at 1,508,719 to 1,509,973
14411
mRNA_6044: 14412 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1,510,436 to 1,511,474
14412
mRNA_6045: 14413 - SUPERFAMILY--SSF54928, at 1,512,060 to 1,513,119
14413
mRNA_6046: 14414 - Hypothetical Protein, at 1,513,700 to 1,515,000
14414
Group
Condition
mRNA
_6042
mRNA
_6043
mRNA
_6044
mRNA
_6045
mRNA
_6046
14410
14411
14412
14413
14414
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
+0.0
-1.7
-0.6
-0.1
growth on oleic acid
YNB Glucose
+0.3
-0.2
+0.1
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.3
-0.4
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.1
-0.2
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.2
+0.1
+0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.0
+0.2
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
-0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.0
-0.3
-0.2
+0.3
auxotrophy
YNB Glucose
-0.2
-0.1
-0.1
-0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
+0.2
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
-0.0
+0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
-0.2
+0.2
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.0
-0.3
+0.5
+0.2
growth on oleic acid
YNB Oleic Acid
+0.2
-0.1
+0.4
-0.1
-0.1
auxotrophy
Dropout Complete
+0.2
-0.3
+0.2
+0.1
+0.0
growth on ricinoleic acid
YNB Glucose
-0.0
+0.2
+0.4
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.1
+0.1
-0.3
+0.6
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.1
-0.3
+0.4
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.2
+0.0
+0.1
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.1
+0.4
+0.1
+0.4
growth on ypd
YPD
+0.1
+0.2
+0.1
+0.6
+0.5
remove
mRNA_6042
plot
remove
mRNA_6043
plot
remove
mRNA_6044
remove
mRNA_6045
plot
remove
mRNA_6046
plot