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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14418 and 14419 are separated by 360 nucleotides
14419 and 14420 are separated by 199 nucleotides
14420 and 14421 are separated by 296 nucleotides
14421 and 14422 are separated by 300 nucleotides
mRNA_6050: 14418 - K03942 NDUFV1 NADH dehydrogenase (ubiquinone) flavoprotein 1, at 1,521,571 to 1,523,726
14418
mRNA_6051: 14419 - Hypothetical Protein, at 1,524,087 to 1,525,475
14419
mRNA_6052: 14420 - Hypothetical Protein, at 1,525,675 to 1,528,680
14420
mRNA_6053: 14421 - Hypothetical Protein, at 1,528,977 to 1,530,261
14421
mRNA_6054: 14422 - Hypothetical Protein, at 1,530,562 to 1,531,285
14422
Group
Condition
mRNA
_6050
mRNA
_6051
mRNA
_6052
mRNA
_6053
mRNA
_6054
14418
14419
14420
14421
14422
auxotrophy
YNB Glucose
N.D.
-0.4
-0.1
-0.4
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.2
-0.5
-0.3
+0.3
auxotrophy
Dropout Complete
N.D.
-0.2
+0.1
-0.5
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.1
-0.3
-0.0
growth on ypd
YPD
N.D.
+0.3
-0.0
-0.4
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.5
+0.2
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.3
-0.0
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.2
-0.0
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
+0.0
-0.5
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.5
+0.0
-0.0
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.4
+0.2
+0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.2
+0.0
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
-0.1
+0.1
-0.1
growth on oleic acid
YNB Glucose
N.D.
-0.1
+0.2
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
-0.0
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.2
+0.4
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
+0.1
+0.4
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
+0.0
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
+0.1
+0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
-0.1
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
-0.1
+0.3
-0.2
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