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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14421 and 14422 are separated by 300 nucleotides
14422 and 14423 are separated by 184 nucleotides
14423 and 14424 are separated by 602 nucleotides
14424 and 14425 overlap by 13 nucleotides
mRNA_6053: 14421 - Hypothetical Protein, at 1,528,977 to 1,530,261
14421
mRNA_6054: 14422 - Hypothetical Protein, at 1,530,562 to 1,531,285
14422
mRNA_6055: 14423 - Hypothetical Protein, at 1,531,470 to 1,536,936
14423
mRNA_6056: 14424 - K13996 EPS1 protein disulfide-isomerase, at 1,537,539 to 1,540,392
14424
mRNA_6057: 14425 - Hypothetical Protein, at 1,540,380 to 1,540,856
14425
Group
Condition
mRNA
_6053
mRNA
_6054
mRNA
_6055
mRNA
_6056
mRNA
_6057
14421
14422
14423
14424
14425
growth on ypd
YPD
-0.4
-0.3
-0.2
+0.1
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.4
-0.0
-0.4
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
+0.1
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
+0.0
+0.0
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.1
+0.2
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.1
-0.0
+0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.3
+0.2
+0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.3
-0.1
+0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.2
+0.2
-0.0
-0.4
growth on ricinoleic acid
YNB Glucose
-0.3
-0.0
+0.2
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
-0.1
-0.2
+0.4
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
-0.1
+0.0
+0.1
growth on oleic acid
YNB Glucose
+0.0
-0.2
+0.1
+0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.0
-0.1
+0.4
auxotrophy
YNB Glucose
-0.4
+0.2
-0.0
+0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.1
+0.0
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
+0.1
+0.0
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.1
+0.0
+0.1
+0.5
auxotrophy
Dropout Complete
-0.5
+0.1
-0.1
+0.1
+1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.1
+0.2
+0.2
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.2
+0.1
+0.3
+0.7
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