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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14422 and 14423 are separated by 184 nucleotides
14423 and 14424 are separated by 602 nucleotides
14424 and 14425 overlap by 13 nucleotides
14425 and 14426 are separated by 232 nucleotides
mRNA_6054: 14422 - Hypothetical Protein, at 1,530,562 to 1,531,285
14422
mRNA_6055: 14423 - Hypothetical Protein, at 1,531,470 to 1,536,936
14423
mRNA_6056: 14424 - K13996 EPS1 protein disulfide-isomerase, at 1,537,539 to 1,540,392
14424
mRNA_6057: 14425 - Hypothetical Protein, at 1,540,380 to 1,540,856
14425
mRNA_6058: 14426 - SUPERFAMILY--SSF52047, at 1,541,089 to 1,542,626
14426
Group
Condition
mRNA
_6054
mRNA
_6055
mRNA
_6056
mRNA
_6057
mRNA
_6058
14422
14423
14424
14425
14426
growth on ypd
YPD
-0.3
-0.2
+0.1
-0.9
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.0
+0.0
-0.6
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.0
-0.4
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.0
+0.2
-0.3
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
+0.0
+0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.2
-0.0
-0.4
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.1
-0.3
-0.0
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
-0.2
+0.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
-0.2
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
-0.1
+0.4
-0.4
growth on oleic acid
YNB Glucose
-0.2
+0.1
+0.1
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.2
+0.4
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.2
+0.0
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.1
+0.0
+0.3
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
+0.2
+0.1
+0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.2
+0.2
+0.6
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.1
+0.3
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.1
+0.3
+0.7
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.0
+0.1
+0.5
+0.2
auxotrophy
YNB Glucose
+0.2
-0.0
+0.3
+0.1
+0.6
auxotrophy
Dropout Complete
+0.1
-0.1
+0.1
+1.0
+0.3
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