Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14425 and 14426 are separated by 232 nucleotides14426 and 14427 are separated by 816 nucleotides14427 and 14428 are separated by 474 nucleotides14428 and 14429 are separated by 309 nucleotides mRNA_6057: 14425 - Hypothetical Protein, at 1,540,380 to 1,540,856 14425 mRNA_6058: 14426 - SUPERFAMILY--SSF52047, at 1,541,089 to 1,542,626 14426 mRNA_6059: 14427 - SUPERFAMILY--SSF52047, at 1,543,443 to 1,544,992 14427 mRNA_6060: 14428 - K14806 DDX31, DBP7 ATP-dependent RNA helicase DDX31/DBP7, at 1,545,467 to 1,548,419 14428 mRNA_6061: 14429 - KOG3772 M-phase inducer phosphatase, at 1,548,729 to 1,549,422 14429
Group Condition mRNA_6057 mRNA_6058 mRNA_6059 mRNA_6060 mRNA_6061
14425 14426 14427 14428 14429
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.6 +0.2 N.D. +0.0
growth on ypd YPD -0.9 +0.2 +0.2 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.1 +0.3 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.2 +0.1 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.2 -0.1 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 -0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.2 +0.2 N.D. +0.2
growth on oleic acid YNB Glucose +0.0 -0.1 +0.0 N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.0 +0.4 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.2 +0.2 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.4 -0.1 N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.4 +0.3 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.1 -0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.2 +0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 +0.1 N.D. +0.4
auxotrophy YNB Glucose +0.1 +0.6 +0.2 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.2 +0.2 N.D. +0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.0 +0.3 N.D. +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 +0.3 N.D. +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.0 +0.1 N.D. +0.2
auxotrophy Dropout Complete +1.0 +0.3 -0.0 N.D. -0.2
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