Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14428 and 14429 are separated by 309 nucleotides14429 and 14430 are separated by 525 nucleotides14430 and 14431 are separated by 285 nucleotides14431 and 14432 are separated by 39 nucleotides mRNA_6060: 14428 - K14806 DDX31, DBP7 ATP-dependent RNA helicase DDX31/DBP7, at 1,545,467 to 1,548,419 14428 mRNA_6061: 14429 - KOG3772 M-phase inducer phosphatase, at 1,548,729 to 1,549,422 14429 mRNA_6062: 14430 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 1,549,948 to 1,551,724 14430 mRNA_6063: 14431 - KOG0519 Sensory transduction histidine kinase, at 1,552,010 to 1,556,333 14431 mRNA_6064: 14432 - Hypothetical Protein, at 1,556,373 to 1,558,599 14432
Group Condition mRNA_6060 mRNA_6061 mRNA_6062 mRNA_6063 mRNA_6064
14428 14429 14430 14431 14432
growth on ypd YPD N.D. -0.3 -0.4 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.2 -0.1 -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.2 -0.1 -0.1 -0.1
auxotrophy YNB Glucose N.D. -0.2 -0.2 -0.0 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.1 +0.2 +0.0
auxotrophy Dropout Complete N.D. -0.2 -0.1 +0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 +0.2 -0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.1 +0.3 -0.0
growth on oleic acid YNB Glucose N.D. +0.1 -0.2 +0.1 -0.0
growth on ricinoleic acid YNB Glucose N.D. -0.2 +0.1 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 +0.3 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.2 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.2 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 +0.1 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.7 -0.2 +0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.5 +0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.4 +0.2 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.7 -0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.4 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 +0.4 +0.0 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 +0.3 +0.1 +0.3
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