Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14430 and 14431 are separated by 285 nucleotides14431 and 14432 are separated by 39 nucleotides14432 and 14433 are separated by 1776 nucleotides14433 and 14434 are separated by 395 nucleotides mRNA_6062: 14430 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 1,549,948 to 1,551,724 14430 mRNA_6063: 14431 - KOG0519 Sensory transduction histidine kinase, at 1,552,010 to 1,556,333 14431 mRNA_6064: 14432 - Hypothetical Protein, at 1,556,373 to 1,558,599 14432 mRNA_6065: 14433 - KOG1082 Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing, at 1,560,376 to 1,561,281 14433 mRNA_6066: 14434 - K20363 YIP1, YIPF5 protein transport protein YIP1, at 1,561,677 to 1,562,701 14434
Group Condition mRNA_6062 mRNA_6063 mRNA_6064 mRNA_6065 mRNA_6066
14430 14431 14432 14433 14434
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 -0.1 -0.5 N.D.
growth on ypd YPD -0.4 -0.1 -0.1 -0.1 N.D.
auxotrophy YNB Glucose -0.2 -0.0 +0.0 -0.4 N.D.
auxotrophy Dropout Complete -0.1 +0.1 +0.0 -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 -0.1 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.1 -0.0 N.D.
growth on oleic acid YNB Glucose -0.2 +0.1 -0.0 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.0 +0.0 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.0 -0.1 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 +0.0 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.0 +0.0 -0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 -0.1 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 -0.0 -0.3 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 -0.1 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.1 -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.1 +0.0 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.0 -0.0 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.1 +0.3 +0.2 N.D.
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