Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14431 and 14432 are separated by 39 nucleotides
14432 and 14433 are separated by 1776 nucleotides
14433 and 14434 are separated by 395 nucleotides
14434 and 14435 are separated by 98 nucleotides
mRNA_6063: 14431 - KOG0519 Sensory transduction histidine kinase, at 1,552,010 to 1,556,333
14431
mRNA_6064: 14432 - Hypothetical Protein, at 1,556,373 to 1,558,599
14432
mRNA_6065: 14433 - KOG1082 Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing, at 1,560,376 to 1,561,281
14433
mRNA_6066: 14434 - K20363 YIP1, YIPF5 protein transport protein YIP1, at 1,561,677 to 1,562,701
14434
mRNA_6067: 14435 - K14798 LTV1 protein LTV1, at 1,562,800 to 1,564,980
14435
Group
Condition
mRNA
_6063
mRNA
_6064
mRNA
_6065
mRNA
_6066
mRNA
_6067
14431
14432
14433
14434
14435
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.5
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.0
-0.5
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.0
-0.5
N.D.
N.D.
auxotrophy
YNB Glucose
-0.0
+0.0
-0.4
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.1
-0.1
N.D.
N.D.
auxotrophy
Dropout Complete
+0.1
+0.0
-0.4
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
-0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
-0.0
N.D.
N.D.
growth on ypd
YPD
-0.1
-0.1
-0.1
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
-0.0
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
+0.1
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.1
+0.1
N.D.
N.D.
growth on oleic acid
YNB Glucose
+0.1
-0.0
-0.2
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
+0.0
-0.2
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.0
-0.3
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.0
-0.3
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.1
+0.1
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.0
-0.1
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.0
+0.1
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.1
+0.2
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.3
+0.2
N.D.
N.D.
remove
mRNA_6063
plot
remove
mRNA_6064
plot
remove
mRNA_6065
remove
mRNA_6066
plot
remove
mRNA_6067
plot