Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14432 and 14433 are separated by 1776 nucleotides14433 and 14434 are separated by 395 nucleotides14434 and 14435 are separated by 98 nucleotides14435 and 14436 are separated by 249 nucleotides mRNA_6064: 14432 - Hypothetical Protein, at 1,556,373 to 1,558,599 14432 mRNA_6065: 14433 - KOG1082 Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing, at 1,560,376 to 1,561,281 14433 mRNA_6066: 14434 - K20363 YIP1, YIPF5 protein transport protein YIP1, at 1,561,677 to 1,562,701 14434 mRNA_6067: 14435 - K14798 LTV1 protein LTV1, at 1,562,800 to 1,564,980 14435 mRNA_6068: 14436 - K01855 PUS3, DEG1 tRNA pseudouridine38/39 synthase, at 1,565,230 to 1,567,371 14436
Group Condition mRNA_6064 mRNA_6065 mRNA_6066 mRNA_6067 mRNA_6068
14432 14433 14434 14435 14436
auxotrophy YNB Glucose +0.0 -0.4 N.D. N.D. -0.8
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.5 N.D. N.D. -0.4
growth on oleic acid YNB Oleic Acid -0.1 -0.0 N.D. N.D. -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.3 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.5 N.D. N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 N.D. N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 N.D. N.D. -0.4
growth on oleic acid YNB Glucose -0.0 -0.2 N.D. N.D. -0.2
auxotrophy Dropout Complete +0.0 -0.4 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 N.D. N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 N.D. N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 N.D. N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.3 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.5 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 N.D. N.D. +0.2
growth on ypd YPD -0.1 -0.1 N.D. N.D. +0.3
growth on ricinoleic acid YNB Glucose +0.0 -0.2 N.D. N.D. +0.4
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 N.D. N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.2 N.D. N.D. +0.0
remove
mRNA_6064
plot
remove
mRNA_6065
plot
remove
mRNA_6066
remove
mRNA_6067
plot
remove
mRNA_6068
plot