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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14438 and 14439 are separated by 1302 nucleotides
14439 and 14440 are separated by 214 nucleotides
14440 and 14441 are separated by 90 nucleotides
14441 and 14442 are separated by 1452 nucleotides
mRNA_6070: 14438 - K14552 NAN1, UTP17, WDR75 NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17), at 1,572,879 to 1,575,986
14438
mRNA_6071: 14439 - Hypothetical Protein, at 1,577,289 to 1,577,537
14439
mRNA_6072: 14440 - Hypothetical Protein, at 1,577,752 to 1,580,946
14440
mRNA_6073: 14441 - Hypothetical Protein, at 1,581,037 to 1,581,657
14441
mRNA_6074: 14442 - Hypothetical Protein, at 1,583,110 to 1,584,006
14442
Group
Condition
mRNA
_6070
mRNA
_6071
mRNA
_6072
mRNA
_6073
mRNA
_6074
14438
14439
14440
14441
14442
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-0.8
-0.7
-0.4
auxotrophy
YNB Glucose
N.D.
N.D.
-0.2
-0.7
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.2
-1.0
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.2
-1.0
+0.2
auxotrophy
Dropout Complete
N.D.
N.D.
+0.1
-0.7
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.1
-0.4
-0.4
growth on ypd
YPD
N.D.
N.D.
-0.5
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.1
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.1
+0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.1
-0.2
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.4
+0.6
+0.0
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.2
-0.3
+0.4
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-0.3
+0.2
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.1
-0.2
+0.7
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
+0.4
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.0
+0.6
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.1
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.1
+0.5
+0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.1
+0.3
+0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.2
+0.3
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.2
+0.5
+0.8
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