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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14440 and 14441 are separated by 90 nucleotides
14441 and 14442 are separated by 1452 nucleotides
14442 and 14443 are separated by 1059 nucleotides
14443 and 14444 are separated by 96 nucleotides
mRNA_6072: 14440 - Hypothetical Protein, at 1,577,752 to 1,580,946
14440
mRNA_6073: 14441 - Hypothetical Protein, at 1,581,037 to 1,581,657
14441
mRNA_6074: 14442 - Hypothetical Protein, at 1,583,110 to 1,584,006
14442
mRNA_6075: 14443 - BLAST Thioredoxin/protein disulfide isomerase [Xanthophyllo..., at 1,585,066 to 1,586,603
14443
mRNA_6076: 14444 - Hypothetical Protein, at 1,586,700 to 1,586,903
14444
Group
Condition
mRNA
_6072
mRNA
_6073
mRNA
_6074
mRNA
_6075
mRNA
_6076
14440
14441
14442
14443
14444
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.7
-0.4
+0.2
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
-1.0
+0.2
-0.3
N.D.
auxotrophy
YNB Glucose
-0.2
-0.7
-0.3
+0.1
N.D.
auxotrophy
Dropout Complete
+0.1
-0.7
-0.2
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.4
-0.4
-0.2
N.D.
growth on ypd
YPD
-0.5
-0.3
+0.2
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
-0.4
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-1.0
+0.1
+0.7
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.6
+0.0
-0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.2
-0.2
+0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
+0.2
-0.0
N.D.
growth on oleic acid
YNB Glucose
+0.2
-0.3
+0.4
-0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
+0.7
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.6
+0.2
+0.0
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
+0.2
+0.5
+0.4
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.4
-0.0
+0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
+0.6
+0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.3
+0.9
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.5
+0.6
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.5
+0.8
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.3
+0.6
+0.2
N.D.
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