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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14442 and 14443 are separated by 1059 nucleotides
14443 and 14444 are separated by 96 nucleotides
14444 and 14445 are separated by 3949 nucleotides
14445 and 14446 are separated by 238 nucleotides
mRNA_6074: 14442 - Hypothetical Protein, at 1,583,110 to 1,584,006
14442
mRNA_6075: 14443 - BLAST Thioredoxin/protein disulfide isomerase [Xanthophyllo..., at 1,585,066 to 1,586,603
14443
mRNA_6076: 14444 - Hypothetical Protein, at 1,586,700 to 1,586,903
14444
mRNA_6077: 14445 - KOG3869 Uncharacterized conserved protein, at 1,590,853 to 1,592,368
14445
mRNA_6078: 14446 - HMMPfam-Essential protein Yae1, N terminal-PF09811, at 1,592,607 to 1,593,994
14446
Group
Condition
mRNA
_6074
mRNA
_6075
mRNA
_6076
mRNA
_6077
mRNA
_6078
14442
14443
14444
14445
14446
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.2
N.D.
N.D.
-0.1
auxotrophy
Dropout Complete
-0.2
-0.2
N.D.
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.4
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.2
N.D.
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.1
N.D.
N.D.
+0.3
auxotrophy
YNB Glucose
-0.3
+0.1
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
N.D.
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.0
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
-0.1
N.D.
N.D.
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.3
N.D.
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.8
-0.3
N.D.
N.D.
-0.2
growth on ypd
YPD
+0.2
-0.1
N.D.
N.D.
+0.3
growth on oleic acid
YNB Oleic Acid
+0.2
-0.3
N.D.
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.0
N.D.
N.D.
+0.3
growth on oleic acid
YNB Glucose
+0.4
-0.1
N.D.
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
-0.0
N.D.
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
+0.2
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.7
N.D.
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.6
+0.1
N.D.
N.D.
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.9
-0.1
N.D.
N.D.
+0.5
growth on ricinoleic acid
YNB Glucose
+0.5
+0.4
N.D.
N.D.
+0.6
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