Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14454 and 14455 are separated by 277 nucleotides
14455 and 14456 are separated by 461 nucleotides
14456 and 14457 are separated by 440 nucleotides
14457 and 14458 are separated by 617 nucleotides
mRNA_6086: 14454 - HMMPfam-Cutinase-PF01083,SUPERFAMILY--SSF53474, at 1,615,836 to 1,616,999
14454
mRNA_6087: 14455 - KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes, at 1,617,277 to 1,619,252
14455
mRNA_6088: 14456 - KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes, at 1,619,714 to 1,621,699
14456
mRNA_6089: 14457 - KOG3098 Uncharacterized conserved protein, at 1,622,140 to 1,623,844
14457
mRNA_6090: 14458 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,624,462 to 1,625,947
14458
Group
Condition
mRNA
_6086
mRNA
_6087
mRNA
_6088
mRNA
_6089
mRNA
_6090
14454
14455
14456
14457
14458
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
-0.3
-0.1
-0.4
growth on oleic acid
YNB Glucose
+0.0
-0.0
-0.2
-0.3
-0.3
growth on ricinoleic acid
YNB Glucose
-0.0
-0.1
-0.3
+0.4
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.1
+0.1
-0.4
-0.0
auxotrophy
Dropout Complete
-0.3
+0.1
+0.1
-0.1
-0.0
growth on ypd
YPD
-0.2
-0.0
-0.1
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.1
+0.0
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.1
-0.1
+0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.2
-0.0
+0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.2
+0.1
+0.5
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.1
-0.1
-0.0
+0.3
auxotrophy
YNB Glucose
-0.0
+0.3
+0.1
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.4
-0.0
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.1
-0.1
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.1
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.1
+0.1
-0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
-0.1
-0.0
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.1
-0.0
+0.1
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.4
+0.1
-0.2
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.3
+0.1
+0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
+0.5
+0.6
+0.5
+0.1
remove
mRNA_6086
plot
remove
mRNA_6087
plot
remove
mRNA_6088
remove
mRNA_6089
plot
remove
mRNA_6090
plot