Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14456 and 14457 are separated by 440 nucleotides14457 and 14458 are separated by 617 nucleotides14458 and 14459 are separated by 124 nucleotides14459 and 14460 are separated by 207 nucleotides mRNA_6088: 14456 - KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes, at 1,619,714 to 1,621,699 14456 mRNA_6089: 14457 - KOG3098 Uncharacterized conserved protein, at 1,622,140 to 1,623,844 14457 mRNA_6090: 14458 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,624,462 to 1,625,947 14458 mRNA_6091: 14459 - KOG1515 Arylacetamide deacetylase, at 1,626,072 to 1,627,990 14459 mRNA_6092: 14460 - K06639 CDC14 cell division cycle 14, at 1,628,198 to 1,631,375 14460
Group Condition mRNA_6088 mRNA_6089 mRNA_6090 mRNA_6091 mRNA_6092
14456 14457 14458 14459 14460
growth on oleic acid YNB Glucose -0.2 -0.3 -0.3 -0.3 +0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.1 -0.4 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 -0.1 -0.4 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.1 +0.3 -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 +0.3 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.4 -0.0 -0.1 +0.5
growth on ypd YPD -0.1 +0.1 +0.0 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 +0.3 +0.0 -0.0
auxotrophy YNB Glucose +0.1 -0.1 -0.1 +0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.2 +0.5 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 +0.2 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 +0.1 +0.0 +0.2
auxotrophy Dropout Complete +0.1 -0.1 -0.0 +0.3 +0.2
growth on ricinoleic acid YNB Glucose -0.3 +0.4 -0.3 +0.3 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 -0.0 +0.4 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 +0.1 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 +0.0 +0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.1 +0.4 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.3 -0.0 +0.2 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.5 -0.5 +0.5 +0.8
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.5 +0.1 +0.3 +0.4
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