Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14459 and 14460 are separated by 207 nucleotides
14460 and 14461 are separated by 250 nucleotides
14461 and 14462 are separated by 175 nucleotides
14462 and 14463 are separated by 793 nucleotides
mRNA_6091: 14459 - KOG1515 Arylacetamide deacetylase, at 1,626,072 to 1,627,990
14459
mRNA_6092: 14460 - K06639 CDC14 cell division cycle 14, at 1,628,198 to 1,631,375
14460
mRNA_6093: 14461 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 1,631,626 to 1,633,865
14461
mRNA_6094: 14462 - K16738 NDE1, NUDE nuclear distribution protein NudE, at 1,634,041 to 1,636,155
14462
mRNA_6095: 14463 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 1,636,949 to 1,643,604
14463
Group
Condition
mRNA
_6091
mRNA
_6092
mRNA
_6093
mRNA
_6094
mRNA
_6095
14459
14460
14461
14462
14463
growth on oleic acid
YNB Oleic Acid
-0.2
+0.2
-0.4
-0.0
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.2
+0.3
-0.1
+0.1
growth on ypd
YPD
+0.2
-0.1
-0.1
-0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.0
-0.1
+0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.4
-0.1
-0.2
-0.3
growth on oleic acid
YNB Glucose
-0.3
+0.3
-0.1
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.0
+0.2
+0.0
-0.0
auxotrophy
Dropout Complete
+0.3
+0.2
-0.2
-0.3
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.2
+0.1
-0.0
+0.2
auxotrophy
YNB Glucose
+0.0
+0.3
+0.1
-0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.2
+0.1
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.3
+0.0
-0.2
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.0
+0.5
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.3
+0.2
+0.4
+0.4
growth on ricinoleic acid
YNB Glucose
+0.3
+0.4
+0.1
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.2
-0.0
+0.4
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.4
+0.4
+0.5
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.5
-0.1
+0.1
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.6
+0.3
-0.0
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
+0.8
+0.0
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.4
+0.2
+0.5
+0.3
remove
mRNA_6091
plot
remove
mRNA_6092
plot
remove
mRNA_6093
remove
mRNA_6094
plot
remove
mRNA_6095
plot