Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14463 and 14464 are separated by 918 nucleotides14464 and 14465 are separated by 288 nucleotides14465 and 14466 overlap by 38 nucleotides14466 and 14467 are separated by 243 nucleotides mRNA_6095: 14463 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 1,636,949 to 1,643,604 14463 mRNA_6096: 14464 - K05721 FGD2 FYVE, RhoGEF and PH domain containing 2, at 1,644,523 to 1,649,566 14464 mRNA_6097: 14465 - KOG4313 Thiamine pyrophosphokinase, at 1,649,855 to 1,650,926 14465 mRNA_6098: 14466 - Hypothetical Protein, at 1,650,889 to 1,652,213 14466 mRNA_6099: 14467 - KOG3091 Nuclear pore complex, p54 component (sc Nup57), at 1,652,457 to 1,654,232 14467
Group Condition mRNA_6095 mRNA_6096 mRNA_6097 mRNA_6098 mRNA_6099
14463 14464 14465 14466 14467
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.0 -0.1 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.2 +0.2 -0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.0 +0.2 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.3 +0.0 -0.3 N.D.
growth on ypd YPD +0.1 +0.0 -0.0 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 +0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.1 -0.0 -0.0 N.D.
auxotrophy YNB Glucose +0.2 +0.0 +0.2 +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.1 +0.4 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 +0.2 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 +0.1 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.5 -0.0 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 +0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.0 +0.1 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.2 +0.2 +0.3 N.D.
growth on oleic acid YNB Glucose +0.2 +0.0 +0.3 +0.4 N.D.
auxotrophy Dropout Complete +0.3 -0.0 +0.4 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.4 +0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.3 +0.1 +0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 +0.8 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.2 +0.2 +0.5 N.D.
remove
mRNA_6095
plot
remove
mRNA_6096
plot
remove
mRNA_6097
remove
mRNA_6098
plot
remove
mRNA_6099
plot