Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14467 and 14468 are separated by 917 nucleotides14468 and 14469 are separated by 1289 nucleotides14469 and 14470 are separated by 640 nucleotides14470 and 14471 are separated by 573 nucleotides mRNA_6099: 14467 - KOG3091 Nuclear pore complex, p54 component (sc Nup57), at 1,652,457 to 1,654,232 14467 mRNA_6100: 14468 - Hypothetical Protein, at 1,655,150 to 1,656,189 14468 mRNA_6101: 14469 - KOG1303 Amino acid transporters, at 1,657,479 to 1,659,479 14469 mRNA_6102: 14470 - K14827 IPI1, TEX10 pre-rRNA-processing protein IPI1, at 1,660,120 to 1,663,221 14470 mRNA_6103: 14471 - K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein), at 1,663,795 to 1,664,238 14471
Group Condition mRNA_6099 mRNA_6100 mRNA_6101 mRNA_6102 mRNA_6103
14467 14468 14469 14470 14471
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.4 -0.2 N.D. -1.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.2 N.D. -0.4
auxotrophy YNB Glucose N.D. -0.0 -0.3 N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.4 N.D. -0.2
auxotrophy Dropout Complete N.D. -0.0 -0.3 N.D. -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 -0.2 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.7 +0.2 N.D. -1.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.0 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.3 N.D. -0.6
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 -0.0 N.D. -0.3
growth on oleic acid YNB Glucose N.D. +0.6 -0.2 N.D. -0.3
growth on ricinoleic acid YNB Glucose N.D. +0.3 -0.2 N.D. -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.4 -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 +0.3 N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.6 +0.5 N.D. -0.8
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.7 +0.1 N.D. -0.6
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 -0.1 N.D. +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 +0.3 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.4 +0.1 N.D. +0.1
growth on ypd YPD N.D. +0.7 +0.0 N.D. +0.2
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