Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14469 and 14470 are separated by 640 nucleotides14470 and 14471 are separated by 573 nucleotides14471 and 14472 are separated by 363 nucleotides14472 and 14473 are separated by 137 nucleotides mRNA_6101: 14469 - KOG1303 Amino acid transporters, at 1,657,479 to 1,659,479 14469 mRNA_6102: 14470 - K14827 IPI1, TEX10 pre-rRNA-processing protein IPI1, at 1,660,120 to 1,663,221 14470 mRNA_6103: 14471 - K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein), at 1,663,795 to 1,664,238 14471 mRNA_6104: 14472 - Hypothetical Protein, at 1,664,602 to 1,665,579 14472 mRNA_6105: 14473 - Hypothetical Protein, at 1,665,717 to 1,666,372 14473
Group Condition mRNA_6101 mRNA_6102 mRNA_6103 mRNA_6104 mRNA_6105
14469 14470 14471 14472 14473
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -1.4 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -1.1 -0.6 +0.1
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.2 -0.5 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.6 -0.4 -0.0
growth on oleic acid YNB Glucose -0.2 N.D. -0.3 +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. -0.4 -0.1 -0.0
auxotrophy YNB Glucose -0.3 N.D. -0.4 +0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. -0.3 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. -0.4 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 N.D. -0.8 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. -0.6 +0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.1 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. -0.5 -0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 N.D. -0.2 +0.5 -0.1
auxotrophy Dropout Complete -0.3 N.D. -0.4 +0.6 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. -0.3 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.2 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.1 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. -0.2 -0.0 -0.1
growth on ypd YPD +0.0 N.D. +0.2 -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.6 -0.1 +0.1
remove
mRNA_6101
plot
remove
mRNA_6102
plot
remove
mRNA_6103
remove
mRNA_6104
plot
remove
mRNA_6105
plot