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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14474 and 14475 are separated by 331 nucleotides
14475 and 14476 are separated by 226 nucleotides
14476 and 14477 are separated by 1086 nucleotides
14477 and 14478 are separated by 440 nucleotides
mRNA_6106: 14474 - K08332 VAC8 vacuolar protein 8, at 223 to 3,658
14474
mRNA_6107: 14475 - K14401 CPSF1, CFT1 cleavage and polyadenylation specificity factor subunit 1, at 3,990 to 10,005
14475
mRNA_6108: 14476 - Hypothetical Protein, at 10,232 to 11,111
14476
mRNA_6109: 14477 - KOG1477 SPRY domain-containing proteins, at 12,198 to 14,626
14477
mRNA_6110: 14478 - Hypothetical Protein, at 15,067 to 15,769
14478
Group
Condition
mRNA
_6106
mRNA
_6107
mRNA
_6108
mRNA
_6109
mRNA
_6110
14474
14475
14476
14477
14478
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
N.D.
-0.9
-0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
N.D.
-0.2
+0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
N.D.
-0.8
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.5
N.D.
+0.1
-0.2
-0.2
auxotrophy
YNB Glucose
-0.2
N.D.
-0.0
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
-0.4
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
N.D.
+0.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
N.D.
+0.3
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
N.D.
-0.3
+0.5
-0.4
growth on oleic acid
YNB Glucose
-0.6
N.D.
-0.1
+0.0
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
N.D.
-0.3
+0.4
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
-0.2
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
N.D.
-0.6
+0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
-0.2
+0.2
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
N.D.
-1.0
+0.1
+0.5
auxotrophy
Dropout Complete
-0.0
N.D.
+0.3
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
-0.1
+0.2
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
N.D.
-0.1
+0.4
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
N.D.
+0.4
+0.3
-0.5
growth on ypd
YPD
-0.1
N.D.
+0.1
-0.0
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.4
N.D.
-0.0
+0.6
-0.1
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