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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14480 and 14481 are separated by 127 nucleotides
14481 and 14482 are separated by 414 nucleotides
14482 and 14483 are separated by 363 nucleotides
14483 and 14484 are separated by 400 nucleotides
mRNA_6112: 14480 - K01785 galM, GALM aldose 1-epimerase, at 17,714 to 19,844
14480
mRNA_6113: 14481 - K17263 CAND1 cullin-associated NEDD8-dissociated protein 1, at 19,972 to 24,805
14481
mRNA_6114: 14482 - Hypothetical Protein, at 25,220 to 26,095
14482
mRNA_6115: 14483 - Hypothetical Protein, at 26,459 to 27,455
14483
mRNA_6116: 14484 - Hypothetical Protein, at 27,856 to 28,790
14484
Group
Condition
mRNA
_6112
mRNA
_6113
mRNA
_6114
mRNA
_6115
mRNA
_6116
14480
14481
14482
14483
14484
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-1.0
-1.4
+0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.4
-2.2
-0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.8
-1.0
-0.2
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.7
-0.7
-0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
-0.5
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
-0.2
-0.3
+0.0
growth on ypd
YPD
-0.2
+0.2
-0.6
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.1
-0.6
+0.0
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.1
-0.4
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.1
-0.2
+0.1
+0.1
auxotrophy
YNB Glucose
-0.1
-0.1
-0.0
-0.1
+0.4
growth on ricinoleic acid
YNB Glucose
+0.3
-0.1
-0.0
+0.0
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.0
+0.4
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.5
+0.2
+0.2
+0.3
growth on oleic acid
YNB Glucose
+0.3
+0.1
+0.2
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.2
+0.3
+0.1
+0.4
growth on oleic acid
YNB Oleic Acid
+0.2
+0.1
+0.5
+0.0
+0.2
auxotrophy
Dropout Complete
-0.2
-0.0
+0.5
+0.3
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.7
+0.3
-0.0
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.0
+0.4
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.2
+0.9
+0.1
+0.4
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