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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14491 and 14492 are separated by 171 nucleotides
14492 and 14493 are separated by 3414 nucleotides
14493 and 14494 are separated by 2442 nucleotides
14494 and 14495 are separated by 2448 nucleotides
mRNA_6123: 14491 - BLAST DNA polymerase [Rhizoctonia solani], at 56,792 to 57,276
14491
mRNA_6124: 14492 - Hypothetical Protein, at 57,448 to 58,239
14492
mRNA_6125: 14493 - KOG1477 SPRY domain-containing proteins, at 61,654 to 62,774
14493
mRNA_6126: 14494 - Hypothetical Protein, at 65,217 to 65,741
14494
mRNA_6127: 14495 - KOG0772 Uncharacterized conserved protein, contains WD40 repeat, at 68,190 to 70,680
14495
Group
Condition
mRNA
_6123
mRNA
_6124
mRNA
_6125
mRNA
_6126
mRNA
_6127
14491
14492
14493
14494
14495
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.1
-2.3
+0.3
N.D.
growth on ricinoleic acid
YNB Glucose
-1.9
-0.1
-0.3
+0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.2
-0.8
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-1.5
+0.1
-0.2
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.2
+0.2
-0.3
-0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-1.1
-0.1
-0.1
+0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.1
-0.6
-0.0
N.D.
auxotrophy
YNB Glucose
-1.1
-0.1
+0.2
+0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.1
-0.0
+0.4
-0.0
N.D.
growth on oleic acid
YNB Glucose
+0.1
-0.2
-0.4
-0.0
N.D.
auxotrophy
Dropout Complete
-1.1
+0.4
+0.6
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.5
+0.1
+0.1
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
-0.2
-0.4
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.2
+0.3
+0.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.1
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.5
-0.5
+0.1
-0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+1.2
-0.2
-0.6
+0.4
N.D.
growth on ypd
YPD
+1.0
-0.2
-0.2
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.0
-0.0
+0.4
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.0
+0.8
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.4
-0.2
+0.5
-0.0
N.D.
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