Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14493 and 14494 are separated by 2442 nucleotides14494 and 14495 are separated by 2448 nucleotides14495 and 14496 are separated by 215 nucleotides14496 and 14497 are separated by 173 nucleotides mRNA_6125: 14493 - KOG1477 SPRY domain-containing proteins, at 61,654 to 62,774 14493 mRNA_6126: 14494 - Hypothetical Protein, at 65,217 to 65,741 14494 mRNA_6127: 14495 - KOG0772 Uncharacterized conserved protein, contains WD40 repeat, at 68,190 to 70,680 14495 mRNA_6128: 14496 - BLAST DEHA2B11858p [Debaryomyces hansenii CBS767], at 70,896 to 71,507 14496 mRNA_6129: 14497 - Hypothetical Protein, at 71,681 to 73,838 14497
Group Condition mRNA_6125 mRNA_6126 mRNA_6127 mRNA_6128 mRNA_6129
14493 14494 14495 14496 14497
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.3 N.D. -0.2 -1.2
ypd buoyancy 40 hrs No Buoyancy Separation -2.3 +0.3 N.D. -0.2 -0.1
growth on oleic acid YNB Glucose -0.4 -0.0 N.D. -0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 N.D. -0.5 -0.2
auxotrophy YNB Glucose +0.2 +0.1 N.D. -0.6 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.0 N.D. +0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.4 N.D. +0.1 -0.6
auxotrophy Dropout Complete +0.6 -0.1 N.D. -0.5 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.0 N.D. +0.0 -0.8
growth on ypd YPD -0.2 +0.4 N.D. -0.1 -0.6
growth on ricinoleic acid YNB Glucose -0.3 +0.0 N.D. +0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.0 N.D. -0.5 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.0 N.D. +0.6 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.4 N.D. +0.0 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 N.D. +0.0 +0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.2 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.1 N.D. -0.1 +0.7
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.3 N.D. -0.3 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.1 N.D. +0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.8 +0.4 N.D. -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.0 N.D. +0.0 +0.5
remove
mRNA_6125
plot
remove
mRNA_6126
plot
remove
mRNA_6127
remove
mRNA_6128
plot
remove
mRNA_6129
plot