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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14494 and 14495 are separated by 2448 nucleotides
14495 and 14496 are separated by 215 nucleotides
14496 and 14497 are separated by 173 nucleotides
14497 and 14498 are separated by 91 nucleotides
mRNA_6126: 14494 - Hypothetical Protein, at 65,217 to 65,741
14494
mRNA_6127: 14495 - KOG0772 Uncharacterized conserved protein, contains WD40 repeat, at 68,190 to 70,680
14495
mRNA_6128: 14496 - BLAST DEHA2B11858p [Debaryomyces hansenii CBS767], at 70,896 to 71,507
14496
mRNA_6129: 14497 - Hypothetical Protein, at 71,681 to 73,838
14497
mRNA_6130: 14498 - K11786 STH1_SNF2 ATP-dependent helicase STH1/SNF2, at 73,930 to 78,529
14498
Group
Condition
mRNA
_6126
mRNA
_6127
mRNA
_6128
mRNA
_6129
mRNA
_6130
14494
14495
14496
14497
14498
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
N.D.
-0.2
-1.2
-0.1
auxotrophy
YNB Glucose
+0.1
N.D.
-0.6
-0.4
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
N.D.
+0.0
-0.8
-0.5
auxotrophy
Dropout Complete
-0.1
N.D.
-0.5
-0.6
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
N.D.
-0.3
-0.2
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
N.D.
+0.1
-0.6
-0.8
growth on oleic acid
YNB Glucose
-0.0
N.D.
-0.4
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
-0.5
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.0
N.D.
-0.5
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
N.D.
-0.3
+0.0
-0.7
ypd buoyancy
40 hrs Median Buoyancy
+0.4
N.D.
+0.0
-0.5
-0.4
growth on ypd
YPD
+0.4
N.D.
-0.1
-0.6
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
N.D.
+0.6
-0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
N.D.
+0.0
-0.4
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.2
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
+0.0
N.D.
+0.2
-0.3
+0.2
growth on oleic acid
YNB Oleic Acid
+0.2
N.D.
-0.1
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
N.D.
+0.0
+0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
N.D.
+0.0
+0.2
+0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
+0.0
+0.2
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
-0.1
+0.7
+1.2
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