Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14497 and 14498 are separated by 91 nucleotides14498 and 14499 are separated by 511 nucleotides14499 and 14500 are separated by 316 nucleotides14500 and 14501 are separated by 923 nucleotides mRNA_6129: 14497 - Hypothetical Protein, at 71,681 to 73,838 14497 mRNA_6130: 14498 - K11786 STH1_SNF2 ATP-dependent helicase STH1/SNF2, at 73,930 to 78,529 14498 mRNA_6131: 14499 - K01057 PGLS, pgl, devB 6-phosphogluconolactonase, at 79,041 to 80,063 14499 mRNA_6132: 14500 - K20630 CHN1_2, ARHGAP2_3 chimaerin, at 80,380 to 84,392 14500 mRNA_6133: 14501 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 85,316 to 87,118 14501
Group Condition mRNA_6129 mRNA_6130 mRNA_6131 mRNA_6132 mRNA_6133
14497 14498 14499 14500 14501
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.8 N.D. -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.1 N.D. -0.5 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.5 N.D. -0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.4 N.D. -0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.4 N.D. -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 N.D. -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.7 N.D. +0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 N.D. -0.3 -0.2
auxotrophy YNB Glucose -0.4 -0.4 N.D. +0.2 +0.0
growth on oleic acid YNB Glucose -0.3 -0.1 N.D. -0.3 +0.1
growth on ypd YPD -0.6 -0.0 N.D. -0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.8 N.D. +0.3 +0.1
auxotrophy Dropout Complete -0.6 -0.1 N.D. +0.2 +0.0
growth on ricinoleic acid YNB Glucose -0.3 +0.2 N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.0 N.D. -0.5 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.0 N.D. +0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.3 N.D. -0.1 +0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.2 N.D. -0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.7 N.D. +0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.8 N.D. +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +1.2 N.D. -0.2 -0.2
remove
mRNA_6129
plot
remove
mRNA_6130
plot
remove
mRNA_6131
remove
mRNA_6132
plot
remove
mRNA_6133
plot