Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14498 and 14499 are separated by 511 nucleotides14499 and 14500 are separated by 316 nucleotides14500 and 14501 are separated by 923 nucleotides14501 and 14502 are separated by 941 nucleotides mRNA_6130: 14498 - K11786 STH1_SNF2 ATP-dependent helicase STH1/SNF2, at 73,930 to 78,529 14498 mRNA_6131: 14499 - K01057 PGLS, pgl, devB 6-phosphogluconolactonase, at 79,041 to 80,063 14499 mRNA_6132: 14500 - K20630 CHN1_2, ARHGAP2_3 chimaerin, at 80,380 to 84,392 14500 mRNA_6133: 14501 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 85,316 to 87,118 14501 mRNA_6134: 14502 - KOG1477 SPRY domain-containing proteins, at 88,060 to 89,781 14502
Group Condition mRNA_6130 mRNA_6131 mRNA_6132 mRNA_6133 mRNA_6134
14498 14499 14500 14501 14502
facs on lipid accumulation Sorted High BODIPY Gate -0.8 N.D. -0.4 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.7 N.D. +0.0 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 N.D. -0.4 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 N.D. -0.3 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.5 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. -0.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.3 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. -0.5 +0.1 N.D.
growth on oleic acid YNB Glucose -0.1 N.D. -0.3 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.8 N.D. +0.3 +0.1 N.D.
auxotrophy YNB Glucose -0.4 N.D. +0.2 +0.0 N.D.
growth on ypd YPD -0.0 N.D. -0.3 +0.3 N.D.
auxotrophy Dropout Complete -0.1 N.D. +0.2 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. +0.4 -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.2 +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.2 N.D. -0.3 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. -0.1 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 N.D. +0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.2 N.D. -0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 N.D. +0.2 +0.0 N.D.
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