Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14509 and 14510 are separated by 812 nucleotides14510 and 14511 are separated by 163 nucleotides14511 and 14512 are separated by 2034 nucleotides14512 and 14513 are separated by 435 nucleotides mRNA_6141: 14509 - HMMPfam-GGL domain-PF00631,SUPERFAMILY--SSF48670, at 106,663 to 106,926 14509 mRNA_6142: 14510 - Hypothetical Protein, at 107,739 to 108,173 14510 mRNA_6143: 14511 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 108,337 to 111,111 14511 mRNA_6144: 14512 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 113,146 to 115,077 14512 mRNA_6145: 14513 - HMMPfam-Protein of unknown function (DUF2456)-PF10445, at 115,513 to 116,915 14513
Group Condition mRNA_6141 mRNA_6142 mRNA_6143 mRNA_6144 mRNA_6145
14509 14510 14511 14512 14513
ypd buoyancy 40 hrs No Buoyancy Separation -1.9 -0.5 -1.0 -0.5 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.6 -0.2 -0.2 -0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 +0.1 -0.4 -0.6 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.3 +0.0 -0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.9 -0.1 -0.4 -0.6 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 -0.1 -0.0 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -0.5 -0.3 -0.1 +0.0
growth on ricinoleic acid YNB Glucose -0.3 +0.5 -0.2 -0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.6 -0.3 -0.5 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -0.1 -0.3 -0.3 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.2 +0.0 +0.1 +0.1
growth on ypd YPD -0.8 -0.1 +0.0 +1.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.7 -0.1 -0.3 -0.3
auxotrophy Dropout Complete +0.8 -0.2 -0.3 +0.6 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.7 +0.4 -0.1 -0.4
auxotrophy YNB Glucose +1.0 -0.0 -0.1 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 +0.6 +0.1 -0.1 -0.3
growth on oleic acid YNB Glucose +0.6 +0.5 -0.2 +0.3 +0.0
auxotrophy YNB Glucose 75mM Methionine +1.2 -0.4 -0.1 +0.5 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 +0.5 +0.1 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +1.4 -0.0 -0.1 +0.3 -0.1
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