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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14509 and 14510 are separated by 812 nucleotides
14510 and 14511 are separated by 163 nucleotides
14511 and 14512 are separated by 2034 nucleotides
14512 and 14513 are separated by 435 nucleotides
mRNA_6141: 14509 - HMMPfam-GGL domain-PF00631,SUPERFAMILY--SSF48670, at 106,663 to 106,926
14509
mRNA_6142: 14510 - Hypothetical Protein, at 107,739 to 108,173
14510
mRNA_6143: 14511 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 108,337 to 111,111
14511
mRNA_6144: 14512 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 113,146 to 115,077
14512
mRNA_6145: 14513 - HMMPfam-Protein of unknown function (DUF2456)-PF10445, at 115,513 to 116,915
14513
Group
Condition
mRNA
_6141
mRNA
_6142
mRNA
_6143
mRNA
_6144
mRNA
_6145
14509
14510
14511
14512
14513
ypd buoyancy
40 hrs No Buoyancy Separation
-1.9
-0.5
-1.0
-0.5
+0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.6
-0.2
-0.2
-0.0
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
+0.1
-0.4
-0.6
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.3
+0.0
-0.0
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.9
-0.1
-0.4
-0.6
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.1
-0.1
-0.0
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
-0.5
-0.3
-0.1
+0.0
growth on ricinoleic acid
YNB Glucose
-0.3
+0.5
-0.2
-0.2
+0.1
growth on oleic acid
YNB Oleic Acid
+0.6
-0.3
-0.5
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
-0.1
-0.3
-0.3
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.4
+0.2
+0.0
+0.1
+0.1
growth on ypd
YPD
-0.8
-0.1
+0.0
+1.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
+0.7
-0.1
-0.3
-0.3
auxotrophy
Dropout Complete
+0.8
-0.2
-0.3
+0.6
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.7
+0.4
-0.1
-0.4
auxotrophy
YNB Glucose
+1.0
-0.0
-0.1
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.9
+0.6
+0.1
-0.1
-0.3
growth on oleic acid
YNB Glucose
+0.6
+0.5
-0.2
+0.3
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+1.2
-0.4
-0.1
+0.5
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
+0.5
+0.1
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+1.4
-0.0
-0.1
+0.3
-0.1
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