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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14515 and 14516 are separated by 661 nucleotides
14516 and 14517 are separated by 426 nucleotides
14517 and 14518 are separated by 345 nucleotides
14518 and 14519 are separated by 196 nucleotides
mRNA_6147: 14515 - Hypothetical Protein, at 120,652 to 120,840
14515
mRNA_6148: 14516 - Hypothetical Protein, at 121,502 to 122,312
14516
mRNA_6149: 14517 - Hypothetical Protein, at 122,739 to 123,475
14517
mRNA_6150: 14518 - KOG3399 Predicted Yippee-type zinc-binding protein, at 123,821 to 124,477
14518
mRNA_6151: 14519 - Hypothetical Protein, at 124,674 to 126,819
14519
Group
Condition
mRNA
_6147
mRNA
_6148
mRNA
_6149
mRNA
_6150
mRNA
_6151
14515
14516
14517
14518
14519
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.5
-2.2
+0.3
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.3
-1.1
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.5
-0.6
-0.1
+0.1
growth on oleic acid
YNB Glucose
N.D.
-0.5
-0.3
-0.2
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.7
+0.0
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
-0.7
-0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
-0.3
+0.0
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.6
+0.0
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
+0.1
+0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.2
+0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
-0.0
-0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.6
+0.5
+0.2
-0.1
auxotrophy
Dropout Complete
N.D.
+0.1
-0.3
+0.2
-0.0
auxotrophy
YNB Glucose
N.D.
+0.1
-0.2
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
+0.3
+0.1
-0.1
growth on ypd
YPD
N.D.
+0.5
-0.3
-0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
-0.1
+0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
-0.1
+0.1
+0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
-0.1
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
+0.4
+0.6
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.6
-0.0
+0.2
+0.2
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