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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14516 and 14517 are separated by 426 nucleotides
14517 and 14518 are separated by 345 nucleotides
14518 and 14519 are separated by 196 nucleotides
14519 and 14520 are separated by 347 nucleotides
mRNA_6148: 14516 - Hypothetical Protein, at 121,502 to 122,312
14516
mRNA_6149: 14517 - Hypothetical Protein, at 122,739 to 123,475
14517
mRNA_6150: 14518 - KOG3399 Predicted Yippee-type zinc-binding protein, at 123,821 to 124,477
14518
mRNA_6151: 14519 - Hypothetical Protein, at 124,674 to 126,819
14519
mRNA_6152: 14520 - HMMPfam-Slx4 endonuclease-PF09494, at 127,167 to 130,520
14520
Group
Condition
mRNA
_6148
mRNA
_6149
mRNA
_6150
mRNA
_6151
mRNA
_6152
14516
14517
14518
14519
14520
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.1
+0.2
-0.1
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.2
+0.3
-0.3
-1.8
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
+0.1
+0.3
-2.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
-2.2
+0.3
-0.5
+0.4
growth on ricinoleic acid
YNB Glucose
-0.6
+0.0
+0.2
+0.1
-1.3
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
+0.2
+0.2
-1.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.7
-0.1
+0.1
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
+0.5
+0.2
-0.1
-1.3
auxotrophy
YNB Glucose
+0.1
-0.2
+0.0
+0.2
-1.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.0
-0.1
-0.2
-0.8
growth on oleic acid
YNB Oleic Acid
-0.7
+0.0
-0.1
+0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.1
+0.1
+0.3
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.1
+0.3
-0.2
-0.3
auxotrophy
Dropout Complete
+0.1
-0.3
+0.2
-0.0
-0.4
growth on oleic acid
YNB Glucose
-0.5
-0.3
-0.2
+0.2
+0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.3
+0.0
-0.3
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-0.0
+0.2
+0.2
-0.9
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.6
-0.1
+0.1
+1.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.3
+0.1
-0.1
-0.0
growth on ypd
YPD
+0.5
-0.3
-0.2
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.4
+0.6
+0.2
-0.1
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