Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14517 and 14518 are separated by 345 nucleotides14518 and 14519 are separated by 196 nucleotides14519 and 14520 are separated by 347 nucleotides14520 and 14521 are separated by 820 nucleotides mRNA_6149: 14517 - Hypothetical Protein, at 122,739 to 123,475 14517 mRNA_6150: 14518 - KOG3399 Predicted Yippee-type zinc-binding protein, at 123,821 to 124,477 14518 mRNA_6151: 14519 - Hypothetical Protein, at 124,674 to 126,819 14519 mRNA_6152: 14520 - HMMPfam-Slx4 endonuclease-PF09494, at 127,167 to 130,520 14520 mRNA_6153: 14521 - K00757 udp, UPP uridine phosphorylase, at 131,341 to 132,602 14521
Group Condition mRNA_6149 mRNA_6150 mRNA_6151 mRNA_6152 mRNA_6153
14517 14518 14519 14520 14521
ypd buoyancy 40 hrs No Buoyancy Separation -2.2 +0.3 -0.5 +0.4 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.3 -0.3 -1.8 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 +0.3 -2.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 +0.2 -1.9 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.2 -0.8 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -1.1 +0.2 -0.1 -0.6 +0.2
auxotrophy YNB Glucose -0.2 +0.0 +0.2 -1.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.1 +0.1 -0.9 +0.7
growth on ricinoleic acid YNB Glucose +0.0 +0.2 +0.1 -1.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.2 -0.1 -1.3 +0.0
auxotrophy Dropout Complete -0.3 +0.2 -0.0 -0.4 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 +0.3 -0.7 +0.2
growth on ypd YPD -0.3 -0.2 +0.3 +0.0 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.2 +0.2 -0.9 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.0 -0.3 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.3 -0.2 -0.3 +0.4
growth on oleic acid YNB Oleic Acid +0.0 -0.1 +0.0 +0.1 +0.3
growth on oleic acid YNB Glucose -0.3 -0.2 +0.2 +0.5 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.6 -0.1 +0.1 +1.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 -0.1 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.6 +0.2 -0.1 +0.2
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