Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14518 and 14519 are separated by 196 nucleotides14519 and 14520 are separated by 347 nucleotides14520 and 14521 are separated by 820 nucleotides14521 and 14522 are separated by 1292 nucleotides mRNA_6150: 14518 - KOG3399 Predicted Yippee-type zinc-binding protein, at 123,821 to 124,477 14518 mRNA_6151: 14519 - Hypothetical Protein, at 124,674 to 126,819 14519 mRNA_6152: 14520 - HMMPfam-Slx4 endonuclease-PF09494, at 127,167 to 130,520 14520 mRNA_6153: 14521 - K00757 udp, UPP uridine phosphorylase, at 131,341 to 132,602 14521 mRNA_6154: 14522 - K16667 PTPRG receptor-type tyrosine-protein phosphatase gamma, at 133,895 to 137,413 14522
Group Condition mRNA_6150 mRNA_6151 mRNA_6152 mRNA_6153 mRNA_6154
14518 14519 14520 14521 14522
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 -0.8 -0.5 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.3 -1.8 -0.2 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.5 +0.4 -0.5 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 -1.9 -0.1 +1.0
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 -2.0 -0.1 +1.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.6 +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.1 -1.3 +0.0 +0.9
growth on ricinoleic acid YNB Glucose +0.2 +0.1 -1.3 -0.0 +0.7
auxotrophy YNB Glucose +0.0 +0.2 -1.2 -0.0 +1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 -0.9 +0.7 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 -0.7 +0.2 +0.3
growth on ypd YPD -0.2 +0.3 +0.0 +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 -0.9 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 -0.3 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.2 -0.1 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 -0.0 +0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.3 +0.5 +0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.0 +0.1 +0.3 +0.8
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +1.2 -0.1 +0.1
auxotrophy Dropout Complete +0.2 -0.0 -0.4 +0.3 +1.3
growth on oleic acid YNB Glucose -0.2 +0.2 +0.5 +0.3 +0.7
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