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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14519 and 14520 are separated by 347 nucleotides
14520 and 14521 are separated by 820 nucleotides
14521 and 14522 are separated by 1292 nucleotides
14522 and 14523 are separated by 332 nucleotides
mRNA_6151: 14519 - Hypothetical Protein, at 124,674 to 126,819
14519
mRNA_6152: 14520 - HMMPfam-Slx4 endonuclease-PF09494, at 127,167 to 130,520
14520
mRNA_6153: 14521 - K00757 udp, UPP uridine phosphorylase, at 131,341 to 132,602
14521
mRNA_6154: 14522 - K16667 PTPRG receptor-type tyrosine-protein phosphatase gamma, at 133,895 to 137,413
14522
mRNA_6155: 14523 - Hypothetical Protein, at 137,746 to 139,265
14523
Group
Condition
mRNA
_6151
mRNA
_6152
mRNA
_6153
mRNA
_6154
mRNA
_6155
14519
14520
14521
14522
14523
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.8
-0.5
-1.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-1.8
-0.2
+0.3
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.6
+0.2
-0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-2.0
-0.1
+1.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-1.9
-0.1
+1.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-1.3
+0.0
+0.9
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
+0.4
-0.5
-0.4
+0.6
auxotrophy
YNB Glucose
+0.2
-1.2
-0.0
+1.1
-0.5
growth on ricinoleic acid
YNB Glucose
+0.1
-1.3
-0.0
+0.7
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.7
+0.2
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.3
+0.4
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.1
+0.2
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.9
+0.7
+0.3
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.5
+0.2
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
+0.4
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
+1.2
-0.1
+0.1
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.9
+0.4
+0.3
+0.7
growth on ypd
YPD
+0.3
+0.0
+0.0
+0.1
+0.9
growth on oleic acid
YNB Oleic Acid
+0.0
+0.1
+0.3
+0.8
+0.1
auxotrophy
Dropout Complete
-0.0
-0.4
+0.3
+1.3
+0.3
growth on oleic acid
YNB Glucose
+0.2
+0.5
+0.3
+0.7
-0.1
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