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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14521 and 14522 are separated by 1292 nucleotides
14522 and 14523 are separated by 332 nucleotides
14523 and 14524 are separated by 1187 nucleotides
14524 and 14525 are separated by 74 nucleotides
mRNA_6153: 14521 - K00757 udp, UPP uridine phosphorylase, at 131,341 to 132,602
14521
mRNA_6154: 14522 - K16667 PTPRG receptor-type tyrosine-protein phosphatase gamma, at 133,895 to 137,413
14522
mRNA_6155: 14523 - Hypothetical Protein, at 137,746 to 139,265
14523
mRNA_6156: 14524 - Hypothetical Protein, at 140,453 to 141,456
14524
mRNA_6157: 14525 - Hypothetical Protein, at 141,531 to 141,923
14525
Group
Condition
mRNA
_6153
mRNA
_6154
mRNA
_6155
mRNA
_6156
mRNA
_6157
14521
14522
14523
14524
14525
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-1.0
-0.0
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.4
+0.6
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
-0.7
+0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.1
-0.5
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.2
-0.1
-0.4
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.3
+0.3
-0.5
N.D.
auxotrophy
YNB Glucose
-0.0
+1.1
-0.5
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.3
+0.2
-0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.9
-0.4
-0.4
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.2
-0.2
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+1.1
-0.4
-0.4
N.D.
growth on ypd
YPD
+0.0
+0.1
+0.9
-0.7
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+1.0
-0.2
-0.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.3
-0.3
+0.3
N.D.
growth on oleic acid
YNB Glucose
+0.3
+0.7
-0.1
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.1
+0.1
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.3
+0.8
+0.1
-0.4
N.D.
growth on ricinoleic acid
YNB Glucose
-0.0
+0.7
+0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
+0.3
+0.2
+0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.3
+0.7
+0.0
N.D.
auxotrophy
Dropout Complete
+0.3
+1.3
+0.3
-0.3
N.D.
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