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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14523 and 14524 are separated by 1187 nucleotides
14524 and 14525 are separated by 74 nucleotides
14525 and 14526 are separated by 495 nucleotides
14526 and 14527 are separated by 357 nucleotides
mRNA_6155: 14523 - Hypothetical Protein, at 137,746 to 139,265
14523
mRNA_6156: 14524 - Hypothetical Protein, at 140,453 to 141,456
14524
mRNA_6157: 14525 - Hypothetical Protein, at 141,531 to 141,923
14525
mRNA_6158: 14526 - BLAST RNA polymerase I specific initiation factor [Rhizocto..., at 142,419 to 143,531
14526
mRNA_6159: 14527 - Hypothetical Protein, at 143,889 to 144,383
14527
Group
Condition
mRNA
_6155
mRNA
_6156
mRNA
_6157
mRNA
_6158
mRNA
_6159
14523
14524
14525
14526
14527
auxotrophy
YNB Glucose
-0.5
-0.5
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.4
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.4
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.4
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.4
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.7
+0.2
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.1
N.D.
N.D.
N.D.
growth on oleic acid
YNB Glucose
-0.1
-0.3
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
N.D.
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+0.1
-0.4
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.1
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.5
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.3
N.D.
N.D.
N.D.
auxotrophy
Dropout Complete
+0.3
-0.3
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.1
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.0
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
-0.1
N.D.
N.D.
N.D.
growth on ypd
YPD
+0.9
-0.7
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.1
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-0.1
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
+0.0
N.D.
N.D.
N.D.
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