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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14526 and 14527 are separated by 357 nucleotides
14527 and 14528 are separated by 259 nucleotides
14528 and 14529 are separated by 58 nucleotides
14529 and 14530 are separated by 192 nucleotides
mRNA_6158: 14526 - BLAST RNA polymerase I specific initiation factor [Rhizocto..., at 142,419 to 143,531
14526
mRNA_6159: 14527 - Hypothetical Protein, at 143,889 to 144,383
14527
mRNA_6160: 14528 - Hypothetical Protein, at 144,643 to 145,145
14528
mRNA_6161: 14529 - Hypothetical Protein, at 145,204 to 145,497
14529
mRNA_6162: 14530 - K11427 DOT1L, DOT1 histone-lysine N-methyltransferase, H3 lysine-79 specific, at 145,690 to 148,355
14530
Group
Condition
mRNA
_6158
mRNA
_6159
mRNA
_6160
mRNA
_6161
mRNA
_6162
14526
14527
14528
14529
14530
growth on ypd
YPD
N.D.
N.D.
N.D.
-0.9
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
-0.5
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
-0.5
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
-0.2
-0.5
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
-0.2
-0.4
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
-0.4
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
-0.5
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
-0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
-0.4
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.8
+0.7
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
+0.1
-0.1
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
+0.4
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.3
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
+0.1
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.2
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.1
+0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
+0.7
+0.2
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