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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14529 and 14530 are separated by 192 nucleotides
14530 and 14531 are separated by 304 nucleotides
14531 and 14532 are separated by 126 nucleotides
14532 and 14533 are separated by 191 nucleotides
mRNA_6161: 14529 - Hypothetical Protein, at 145,204 to 145,497
14529
mRNA_6162: 14530 - K11427 DOT1L, DOT1 histone-lysine N-methyltransferase, H3 lysine-79 specific, at 145,690 to 148,355
14530
mRNA_6163: 14531 - HMMPfam-Autophagy protein 16 (ATG16)-PF08614, at 148,660 to 149,493
14531
mRNA_6164: 14532 - BLAST ECSIT domain-containing protein [Rhizoctonia solani A..., at 149,620 to 151,505
14532
mRNA_6165: 14533 - HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-F-box-like-PF12937,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF50978,SUPERFAMILY--SSF81383, at 151,697 to 155,852
14533
Group
Condition
mRNA
_6161
mRNA
_6162
mRNA
_6163
mRNA
_6164
mRNA
_6165
14529
14530
14531
14532
14533
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.5
-3.7
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
+0.7
-4.1
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
+0.3
-2.3
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
-1.9
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.3
-0.5
N.D.
+0.2
growth on ypd
YPD
-0.9
+0.0
+0.0
N.D.
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.2
-0.7
N.D.
-0.0
growth on oleic acid
YNB Oleic Acid
-0.5
-0.3
+0.2
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.2
-0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
+0.2
-1.5
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.5
-0.6
N.D.
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.3
-0.3
N.D.
+0.1
auxotrophy
Dropout Complete
-0.2
-0.4
+0.1
N.D.
+0.2
growth on oleic acid
YNB Glucose
-0.5
-0.1
+0.6
N.D.
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.1
+0.5
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.1
+0.3
N.D.
+0.1
auxotrophy
YNB Glucose
+0.4
-0.3
+0.4
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.8
+0.1
N.D.
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
+0.3
+0.3
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
+0.6
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.4
+0.8
N.D.
+0.0
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