Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14536 and 14537 are separated by 126 nucleotides14537 and 14538 are separated by 346 nucleotides14538 and 14539 are separated by 100 nucleotides14539 and 14540 are separated by 433 nucleotides mRNA_6168: 14536 - SUPERFAMILY--SSF52047, at 160,980 to 164,129 14536 mRNA_6169: 14537 - K20304 TRAPPC6, TRS33 trafficking protein particle complex subunit 6, at 164,256 to 165,475 14537 mRNA_6170: 14538 - KOG3476 Microtubule-associated protein CRIPT, at 165,822 to 166,606 14538 mRNA_6171: 14539 - SUPERFAMILY--SSF52047, at 166,707 to 169,416 14539 mRNA_6172: 14540 - K02685 PRI2 DNA primase large subunit, at 169,850 to 171,909 14540
Group Condition mRNA_6168 mRNA_6169 mRNA_6170 mRNA_6171 mRNA_6172
14536 14537 14538 14539 14540
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. -0.8 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.8 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. -0.6 -0.2 N.D.
auxotrophy Dropout Complete -0.0 N.D. -0.7 -0.1 N.D.
auxotrophy YNB Glucose -0.1 N.D. -0.4 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -0.6 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. -0.1 +0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.3 -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.2 +0.2 N.D.
growth on oleic acid YNB Glucose -0.1 N.D. -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.0 +0.1 N.D.
growth on ypd YPD -0.1 N.D. -0.4 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.0 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. +0.5 -0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. -0.1 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.3 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. +0.4 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.3 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.2 +0.2 N.D.
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