Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14542 and 14543 are separated by 261 nucleotides14543 and 14544 are separated by 1415 nucleotides14544 and 14545 are separated by 379 nucleotides14545 and 14546 are separated by 993 nucleotides mRNA_6174: 14542 - BLAST Glycoside hydrolase [Aureobasidium pullulans], at 176,764 to 178,095 14542 mRNA_6175: 14543 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 178,357 to 180,910 14543 mRNA_6176: 14544 - K03000 RPA12, ZNRD1 DNA-directed RNA polymerase I subunit RPA12, at 182,326 to 182,954 14544 mRNA_6177: 14545 - K00868 pdxK, pdxY pyridoxine kinase, at 183,334 to 184,793 14545 mRNA_6178: 14546 - K17623 HDHD1 pseudouridine 5'-phosphatase, at 185,787 to 186,902 14546
Group Condition mRNA_6174 mRNA_6175 mRNA_6176 mRNA_6177 mRNA_6178
14542 14543 14544 14545 14546
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 -0.9 N.D. +0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 N.D. -0.2 -0.3
growth on oleic acid YNB Glucose -0.2 -0.1 N.D. -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 +0.2 N.D. -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.4 N.D. -0.6 -0.2
growth on ypd YPD -0.3 +0.1 N.D. -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.2 N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.0 N.D. +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.1 N.D. -0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.1 N.D. +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 N.D. +0.0 -0.1
auxotrophy Dropout Complete +0.0 -0.0 N.D. +0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.3 N.D. +0.6 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 N.D. +0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.1 N.D. -0.0 +0.0
growth on ricinoleic acid YNB Glucose +0.2 -0.2 N.D. +0.5 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 N.D. +0.3 -0.0
auxotrophy YNB Glucose +0.4 +0.2 N.D. +0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.2 N.D. -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 N.D. +0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.5 N.D. +0.2 +0.1
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