Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14546 and 14547 are separated by 378 nucleotides
14547 and 14548 are separated by 112 nucleotides
14548 and 14549 are separated by 456 nucleotides
14549 and 14550 are separated by 796 nucleotides
mRNA_6178: 14546 - K17623 HDHD1 pseudouridine 5'-phosphatase, at 185,787 to 186,902
14546
mRNA_6179: 14547 - KOG2101 Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s), at 187,281 to 188,756
14547
mRNA_6180: 14548 - KOG0218 Mismatch repair MSH3, at 188,869 to 192,529
14548
mRNA_6181: 14549 - K13126 PABPC polyadenylate-binding protein, at 192,986 to 195,356
14549
mRNA_6182: 14550 - K06665 SSN6 glucose repression mediator protein, at 196,153 to 199,901
14550
Group
Condition
mRNA
_6178
mRNA
_6179
mRNA
_6180
mRNA
_6181
mRNA
_6182
14546
14547
14548
14549
14550
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-1.3
-1.7
N.D.
-2.9
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.9
-1.2
N.D.
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.4
-0.8
N.D.
-1.3
growth on ricinoleic acid
YNB Glucose
-0.2
-0.3
-0.7
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.8
+0.2
N.D.
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.0
-0.7
N.D.
-0.5
auxotrophy
YNB Glucose
-0.2
-0.3
-0.3
N.D.
-0.6
growth on oleic acid
YNB Glucose
-0.2
-0.3
-0.5
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.9
+0.1
N.D.
-2.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.6
-1.2
N.D.
+1.0
auxotrophy
Dropout Complete
-0.2
+0.0
-0.3
N.D.
-0.2
growth on ypd
YPD
+0.1
-1.1
-0.4
N.D.
+0.9
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
-0.1
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.4
+0.0
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.0
-0.2
N.D.
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.5
-0.1
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.0
-0.1
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.7
+0.7
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.7
-0.2
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.3
+0.1
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
+0.3
N.D.
+1.8
remove
mRNA_6178
plot
remove
mRNA_6179
plot
remove
mRNA_6180
remove
mRNA_6181
plot
remove
mRNA_6182
plot