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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14550 and 14551 are separated by 658 nucleotides
14551 and 14552 are separated by 821 nucleotides
14552 and 14553 are separated by 208 nucleotides
14553 and 14554 are separated by 197 nucleotides
mRNA_6182: 14550 - K06665 SSN6 glucose repression mediator protein, at 196,153 to 199,901
14550
mRNA_6183: 14551 - Hypothetical Protein, at 200,560 to 201,520
14551
mRNA_6184: 14552 - Hypothetical Protein, at 202,342 to 203,677
14552
mRNA_6185: 14553 - SUPERFAMILY--SSF69118, at 203,886 to 204,987
14553
mRNA_6186: 14554 - K01613 psd, PISD phosphatidylserine decarboxylase, at 205,185 to 207,177
14554
Group
Condition
mRNA
_6182
mRNA
_6183
mRNA
_6184
mRNA
_6185
mRNA
_6186
14550
14551
14552
14553
14554
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.9
-0.3
-0.2
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-2.0
+0.1
+0.0
+0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
+0.1
-0.2
-1.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.2
-0.5
-1.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
+0.0
-0.3
-0.3
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.3
+0.0
+0.2
-0.1
N.D.
growth on oleic acid
YNB Glucose
-0.3
-0.0
-0.0
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.2
+0.6
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
-0.4
+0.1
+0.3
-0.2
N.D.
auxotrophy
YNB Glucose
-0.6
-0.1
+0.8
-0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
+0.1
+0.1
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.0
+0.4
-0.5
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.2
+0.4
-0.4
N.D.
growth on oleic acid
YNB Oleic Acid
-0.0
+0.0
+0.1
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
+0.7
-0.0
N.D.
auxotrophy
Dropout Complete
-0.2
-0.0
+0.6
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
-0.3
+0.6
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+1.0
+0.3
+0.4
-0.7
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.1
+0.1
+0.6
N.D.
growth on ypd
YPD
+0.9
-0.1
+0.2
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.8
-0.0
-0.3
+1.7
N.D.
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