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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14552 and 14553 are separated by 208 nucleotides
14553 and 14554 are separated by 197 nucleotides
14554 and 14555 are separated by 1043 nucleotides
14555 and 14556 are separated by 172 nucleotides
mRNA_6184: 14552 - Hypothetical Protein, at 202,342 to 203,677
14552
mRNA_6185: 14553 - SUPERFAMILY--SSF69118, at 203,886 to 204,987
14553
mRNA_6186: 14554 - K01613 psd, PISD phosphatidylserine decarboxylase, at 205,185 to 207,177
14554
mRNA_6187: 14555 - BLAST Cytoplasmic dynein 1 intermediate chain 1 [Wallem..., at 208,221 to 211,423
14555
mRNA_6188: 14556 - Hypothetical Protein, at 211,596 to 212,147
14556
Group
Condition
mRNA
_6184
mRNA
_6185
mRNA
_6186
mRNA
_6187
mRNA
_6188
14552
14553
14554
14555
14556
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-1.0
N.D.
-0.3
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-1.1
N.D.
+0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.1
N.D.
-0.9
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.5
N.D.
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.3
N.D.
+0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.3
N.D.
-0.8
-0.1
growth on oleic acid
YNB Glucose
-0.0
+0.1
N.D.
-0.2
-0.1
growth on ypd
YPD
+0.2
-0.0
N.D.
-0.4
-0.1
growth on ricinoleic acid
YNB Glucose
+0.3
-0.2
N.D.
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.5
N.D.
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.2
N.D.
-0.3
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
N.D.
-0.4
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.6
-0.2
N.D.
-0.2
-0.3
auxotrophy
YNB Glucose
+0.8
-0.2
N.D.
-0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-0.7
N.D.
+0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.4
-0.4
N.D.
-0.1
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.6
N.D.
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.7
-0.0
N.D.
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.6
N.D.
-0.3
-0.0
auxotrophy
Dropout Complete
+0.6
+0.1
N.D.
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+1.7
N.D.
-0.3
-0.2
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