Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14554 and 14555 are separated by 1043 nucleotides14555 and 14556 are separated by 172 nucleotides14556 and 14557 are separated by 209 nucleotides14557 and 14558 are separated by 558 nucleotides mRNA_6186: 14554 - K01613 psd, PISD phosphatidylserine decarboxylase, at 205,185 to 207,177 14554 mRNA_6187: 14555 - BLAST Cytoplasmic dynein 1 intermediate chain 1 [Wallem..., at 208,221 to 211,423 14555 mRNA_6188: 14556 - Hypothetical Protein, at 211,596 to 212,147 14556 mRNA_6189: 14557 - ProSiteProfiles-Tyrosine specific protein phosphatases family profile.-PS50056,SUPERFAMILY--SSF52799, at 212,357 to 214,481 14557 mRNA_6190: 14558 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 215,040 to 217,246 14558
Group Condition mRNA_6186 mRNA_6187 mRNA_6188 mRNA_6189 mRNA_6190
14554 14555 14556 14557 14558
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.9 -0.2 -0.1 -0.3
growth on oleic acid YNB Glucose N.D. -0.2 -0.1 -0.2 -0.6
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.3 -0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.8 -0.1 +0.1 -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.4 +0.0 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 -0.0 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 -0.0 +0.0 -0.2
growth on ypd YPD N.D. -0.4 -0.1 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -0.2 +0.0 -0.2
auxotrophy YNB Glucose N.D. -0.2 -0.3 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.0 +0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 -0.0 +0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 +0.2 +0.0 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.1 +0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 +0.1 +0.3 -0.3
auxotrophy Dropout Complete N.D. +0.0 +0.1 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 +0.0 +0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.2 +0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 -0.1 +0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.3 +0.5 +0.0
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